Page Index - galizia-lab/pyview GitHub Wiki
76 page(s) in this GitHub Wiki:
- Home
- Welcome to the repository containing the python implementation of PyView
- Contents
- home
- Welcome to the repository containing the python implementation of VIEW
- Contents
- About log files
- Artifact Correction Flags
- Background Flags
- Batch analysis: movies
- Batch analysis: tapestries
- Batch analysis: traces
- Components of ILTIS window
- Components of VIEW window
- Creating a custom CTV
- Creating a python environment
- Creating measurement lists
- Data organization and preparation
- Define experiment : create a list file
- Define experimental settings: create a .yml file
- Developer Guide
- Download and configure test data
- Download and register test data
- FAQ
- FAQs about viewing tapestries
- Flags usage
- Generating Movies
- Generating Overviews
- Generating Traces
- Getting Started
- Glossary
- GUI guides
- Guide to accessing flags
- Guide to adding a filter to raw data pre processing
- Guide to adding new experiment setups
- Guide to adding new flags
- Guide to adding new signal calculation methods
- Guide to creating tapestries
- Guide to exporting movies
- Guide to exporting processed data to MAT file
- Guide to exporting traces
- Guide to movement correction
- Hands on Tutorial with synthetic data
- How to add modules for segmentation to VIEW
- How to load data in VIEW and calculate signals
- ILTIS: ROIs and traces
- Install anaconda
- Installation and updating
- Introduction
- List of Movement Correction plugins and their parameters
- Loading data flags
- Loading data in PyView GUI
- Movie flags
- Movie gallery
- Output structure
- Overview flags
- Overview gallery
- Paths Flags
- Philosophy of the program
- Preparing your computer for communication with the Gitlab Repository of Uni Konstanz
- Reading exported MAT files
- Recommended folder structure
- Report generation flags
- Run PyView: getting started
- Run PyView: load data using YML file
- Signal calculation Flags
- Specifying stimulus on off times
- System flags
- Tapestry Configuration file
- Transfer Data to ILTIS
- Tutorial
- Unit Testing
- User Manual
- Using CTVs
- What happens during signal calculation?
- YML files and how to use them