Page Index - bokulich-lab/q2-annotate GitHub Wiki

149 page(s) in this GitHub Wiki:

• Home
• MOSHPIT
• Components
• Installation
• Issues
• bin‐contigs‐metabat
• Please reload this page
• BrackenDB
• Please reload this page
• build‐custom‐diamond‐db
• Please reload this page
• build‐eggnog‐diamond‐db
• Please reload this page
• build‐kraken‐db
• Please reload this page
• classify‐kaiju
• Please reload this page
• classify‐kraken2
• Please reload this page
• collate‐annotations
• Please reload this page
• collate‐feature‐data‐mags
• Please reload this page
• collate‐orthologs
• Please reload this page
• collate‐sample‐data‐mags
• Please reload this page
• dereplicate‐mags
• Please reload this page
• DistanceMatrix
• Please reload this page
• EggnogHmmerIdmap
• Please reload this page
• eggnog‐annotate
• Please reload this page
• eggnog‐diamond‐search
• Please reload this page
• eggnog‐hmmer‐search
• Please reload this page
• estimate‐bracken
• Please reload this page
• evaluate‐busco
• Please reload this page
• FeatureData[Kraken2Outputs]
• Please reload this page
• FeatureData[Kraken2Reports]
• Please reload this page
• FeatureData[MAG]
• Please reload this page
• FeatureData[NOG]
• Please reload this page
• FeatureData[ProteinSequence]
• Please reload this page
• FeatureData[Sequence]
• Please reload this page
• FeatureData[Taxonomy]
• Please reload this page
• FeatureTable[Frequency]
• Please reload this page
• FeatureTable[PresenceAbsence]
• Please reload this page
• fetch‐busco‐db
• Please reload this page
• fetch‐diamond‐db
• Please reload this page
• fetch‐eggnog‐db
• Please reload this page
• fetch‐eggnog‐hmmer‐db
• Please reload this page
• fetch‐eggnog‐proteins
• Please reload this page
• fetch‐kaiju‐db
• Please reload this page
• fetch‐ncbi‐taxonomy
• Please reload this page
• Functional Annotation of MAGs (or Contigs)
• Please reload this page
• Generate MAGs from Reads
• Please reload this page
• GenomeData[Genes]
• Please reload this page
• GenomeData[Loci]
• Please reload this page
• GenomeData[Proteins]
• Please reload this page
• Importing and Exporting Data into Qiime2
• Please reload this page
• inspect‐kraken2‐db
• Please reload this page
• KaijuDB
• Please reload this page
• Kraken2DB
• Please reload this page
• Kraken2DBReport
• Please reload this page
• kraken2‐to‐features
• Please reload this page
• kraken2‐to‐mag‐features
• Please reload this page
• MAG Quality Control
• Please reload this page
• partition‐feature‐data‐mags
• Please reload this page
• partition‐orthologs
• Please reload this page
• partition‐sample‐data‐mags
• Please reload this page
• Predict Genes from MAGs
• Please reload this page
• predict‐genes‐prodigal
• Please reload this page
• ProfileHMM[MultipleProtein]
• Please reload this page
• ProfileHMM[PressedProtein]
• Please reload this page
• qiime tools citations
• Please reload this page
• ReferenceDB[BuscoDB]
• Please reload this page
• ReferenceDB[Diamond]
• Please reload this page
• ReferenceDB[Eggnog]
• Please reload this page
• ReferenceDB[EggnogProteinSequences]
• Please reload this page
• ReferenceDB[NCBITaxonomy]
• Please reload this page
• SampleData[BLAST6]
• Please reload this page
• SampleData[Contigs]
• Please reload this page
• SampleData[Kraken2Outputs]
• Please reload this page
• SampleData[Kraken2Reports]
• Please reload this page
• SampleData[MAGs]
• Please reload this page
• SampleData[PairedEndSequencesWithQuality]
• Please reload this page
• SampleData[SequencesWithQuality]
• Please reload this page
• what_to_do
• Please reload this page
• 🎬 Actions
• Please reload this page
• 🔠 Semantic Types
• Please reload this page
• 🧑🏻‍🏫 Tutorials
• Please reload this page