My Refereed Publications Between 2020 to 2023 - mauriceling/mauriceling.github.io GitHub Wiki

[125] Lao, S, Seow, SK, Ong, RT, Dave, VS, Ling, MHT. 2023. Systematic Review on the Effects of Food on Mental Health via Gut Microbiome. SciMedicine Journal 5(2): 81-91.

[124] Işık, EB, Brazas, MD, Schwartz, R, Gaeta, B, Palagi, PM, van Gelder, CWG, Suravajhala, P, Singh, H, Morgan, SL, Zahroh, H, Ling, M, Satagopam, VP, McGrath, A, Nakai, K, Tan, TW, Gao, G, Mulder, N, Schönbach, C, Zheng, Y. De Las Rivas, J, Khan, AM. 2023. Grand Challenges in Bioinformatics Education and Training. Nature Biotechnology 41: 1171–1174.

[123] Dundas, JB, Ling, MHT. 2023. A Computational Approach to Understand the Human Thought Process. 3rd International Conference on Electronic and Electrical Engineering and Intelligent System (ICE3IS).

[122] Chia, VSQ, Ling, MHT. 2023. Potential Information Processing Differences in Male and Hermaphrodite Neural Networks of Caenorhabditis elegans. Medicon Medical Sciences 5(2): 53-59.

[121] Shin, AW, Yan, LZW, Poh, KSH, Ling, MHT. 2023. Science/Education Portraits VIII: Duoethnography of First-Generation Bioscience Undergraduates in a Private Education Institute in Singapore. Acta Scientific Microbiology 6(6): 24-35.

[120] Ling, MHT. 2023. ChatGPT (Feb 13 Version) is a Chinese Room. Novel Research in Sciences 14(2): NRS.000832.

[119] Toh, BCY, Ling, MHT. 2023. Applications Utilizing CRISPR/Cas9. Novel Research in Sciences 14(1): NRS.000826.

[118] Roh, D, Naing, SY, Ling, MHT. 2023. Peptide Properties of Saccharomyces arboricola H-6 Suggest Randomness in Chromosomal Organization. EC Microbiology 19(3): 01-08.

[117] Wong, KM, Sim, BJH, Ling, MHT. 2023. Consistency Between Saccharomyces cerevisiae S288C Genome Scale Models (iND750 and iMM904). Acta Scientific Microbiology 6(3): 63-68.

[116] Ling, MHT, Musttakim, S, Lau, PN. 2023. Development of a Basic Chemistry Conversational Corpus. Acta Scientific Nutritional Health 7(2): 48-54.

[115] Azan, NK, Ng, ASY, Samsudi, F, Mazlan, MR, Loh, YK, Ling, MHT. 2023. A 5-Year Systematic Review (2018 to 2022) on The Effectiveness of Mediterranean Diet in Preventing Alzheimer’s Disease. Acta Scientific Nutritional Health 7(2): 79-90.

[114] Ng, ASY, Azan, NK, Samsudi, F, Mazlan, MR, Loh, YK, Ling, MHT. 2023. A 5-Year Systematic Review (01 April 2017 to 31 March 2022) on the Causes of Abdominal Obesity. EC Clinical and Medical Case Reports 6(1): 90-110.

[113] Naing, SY, Thia, EWJ, Roh, D, Chew, C, Tun, SK, Wai, MK, Ling, MHT. 2023. Novel Populations from Simulated Admixed Populations. Medicon Medical Sciences 4(1): 9-15.

[112] Tan, JZH, Tan, NTF Tan, Ling, MHT. 2022. Brainopy: A Biologically Relevant SQLite-Based Artificial Neural Network Library. Acta Scientific Computer Sciences 4(12): 13-22.

[111] Loh, BJK, Kannan, KSS, Patil, T, Vij, R, Ling, MHT. 2022. Inconsistent Phylogenetic Trees from Nucleotide or Amino Acid Sequences from Mammalian Mitochondrial Genomes. EC Clinical and Medical Case Reports 5(7): 03-09.

[110] Sim, BJH, Wong, KM, Ling, MHT. 2022. Metabolite Overproduction Potential of Saccharomyces cerevisiae S288C Explored Using Its Genome-Scale Metabolic Model, iMM904. EC Microbiology 18(7): 46-51.

[109] Maitra, A, Ling, MHT. 2022. DOSSIER: A Toolkit to Extract Data from Digital Life Simulations Using Dose. Acta Scientific Computer Sciences 4(7): 37-40.

[108] Kannan, KSS, Patil, T, Vij, R, Loh, BJK, Ling, MHT. 2022. Nutrient Availability Impacts Intracellular Metabolic Profiles in Digital Organisms. Acta Scientific Microbiology 5(6): 18-25.

[107] Tang, AY, Ling, MHT. 2022. Relapse Processes are Important in Modelling Drug Epidemic. Acta Scientific Medical Sciences 6(6): 177-182.

[106] Wee, YY, Kng, X, Sor, SX, Ling, MHT. 2022. Genome-Scale Metabolic Model-Based Reactome-Phenome Map of Synechocystis sp. PCC 6803, A Potential Biofuel Producer. Medicon Microbiology 1 (4): 02-08.

[105] Sor, SX, Wee, YY, Kng, X, Ling, MHT. 2022. A Systematic Scoping Review on the Current Applications of Environmental DNA (eDNA). EC Clinical and Medical Case Reports 5(4): 46-64.

[104] Chua, MTE, Dumanglas, ABG, Ling, MHT. 2022. Gene Co-Expressions Cannot Predict Protein-Protein Interactions in Escherichia coli. EC Microbiology 18(3): 102-109.

[103] Tan, FL, Kuan, ZJ, Amir-Hamzah, N, Kng, X, Wee, YY, Sor, SX, Ling, MHT. 2022. Significant Differences in Media Components and Predicted Growth Rates of 58 Escherichia coli Genome-scale Models. Acta Scientific Microbiology 5(2): 56-68.

[102] Amir-Hamzah, N, Kuan, ZJ, Ling, MHT. 2022. Kinetic Models with Default Enzyme Kinetics from Genome-scale Models. Acta Scientific Computer Sciences 4(1): 59-63.

[101] Ling, MHT. 2021. ZeroOne: Building and Enhancing Executing Simulation by Incremental Patches. Acta Scientific Computer Sciences 3(10): 50-52.

[100] Sim, KS, Ling, MHT. 2021. Installation and Documentation Evaluation of Recent (01 January 2020 to 15 February 2021) Chatbot Engines from Python Package Index (PyPI). Acta Scientific Computer Sciences 3(8): 38-43.

[99] Ang, DGY, Ling, MHT. 2021. Sudden and Steep Harsh Environment Results in Over-Compensation in Digital Organisms. EC Microbiology 17(7): 104-113.

[98] Johny, A, Sumedha, PR, Ling, MHT. 2021. Simulation Suggests that One-Off Simple Supplementation from the Wild into Captive Population May Not Increase Captive Genetic Diversity. EC Veterinary Science 6(7): 107-111.

[97] Lim, GZK, Azmi, HH, Dolmatova, M, Ling, MHT. 2021. Significant Differences in Nucleotide and Peptide Features Between Chromosomes Suggesting Sequence Non-Randomness Across Chromosomes. Acta Scientific Microbiology 4(4): 23-28.

[96] Kuan, ZJ, Amir-Hamzah, N, Ling, MHT. 2021. Coffee as a Potential Nutraceutical. EC Nutrition 16(3): 57-65.

[95] Kim, KD, Chua, SCH, Ling, MHT. 2021. Science/Education Portraits VII Statistical Methods Used in 1081 Papers Published in Year 2020 Across 12 Life Science Journals Under BioMed Central. Acta Scientific Nutritional Health 5(3): 06-12.

[94] Cho, JL, Ling, MHT. 2021. Adaptation of Whole Cell Kinetic Model Template, UniKin1, to Escherichia coli Whole Cell Kinetic Model, ecoJC20. EC Microbiology 17(2): 254-260.

[93] Chua, SCH, Ling, MHT. 2021. Stop Codon Usage Varies on CDS Length, Nucleotide Compositions, and Peptide Instability in Six Escherichia coli Strains. EC Clinical and Medical Case Reports 4(2): 39-46.

[92] Kuan, ZJ, Ling, MHT. 2021. Core Genome of Poales, An Economically Important Order of Monocotyledons. EC Agriculture 7(2): 24-29.

[91] Ling, MHT. 2020. Low Classification Accuracy by Logistic Regression, Support Vector Classifier, and Multi-Layer Perceptron, but Not Decision Tree, on Random Attributes from Hadamard Matrix. EC Clinical and Medical Case Reports 3(12): 07-10.

[90] Teo, YH, Ling, MHT. 2020. A Systematic Review on the Sufficiency of PubMed and Google Scholar for Biosciences. Acta Scientific Medical Sciences 4(12): 03-08.

[89] Wang, VCC, Ling, MHT. 2020. Science/Education Portraits VI: Anecdotes of Life in Singapore During COVID-19 (February 2020 to September 2020). EC Clinical and Medical Case Reports 3(11): 98-111.

[88] Chew, SSM, Murthy, MV, Kamarudin, NJ, Wang, VCC, Tan, XT, Ramesh, A, Yablochkin, NV, Mathivanan, K, Ling, MHT. 2020. Rapid Genetic Diversity with Variability between Replicated Digital Organism Simulations and its Implications on Cambrian Explosion. EC Clinical and Medical Case Reports 3(11): 64-68.

[87] Liu, TT, Ling, MHT. 2020. BactClass: Simplifying the Use of Machine Learning in Biology and Medicine. Acta Scientific Medical Sciences 4(11): 43-47.

[86] Ling, MHT. 2020. AdvanceSyn Toolkit: An Open-Source Suite for Model Development and Analysis in Biological Engineering. MOJ Proteomics & Bioinformatics 9(4):83‒86.

[85] Murthy, MV, Balan, D, Kamarudin, NJ, Wang, VCC, Tan, XT, Ramesh, A, Chew, SSM, Yablochkin, NV, Mathivanan, K, Ling, MHT. 2020. UniKin1: A Universal, Non-Species-Specific Whole Cell Kinetic Model. Acta Scientific Microbiology 3(10): 04-08.

[84] Wang, VCC, Kamarudin, NJ, Tan, XT, Ramesh, A, Chew, SSM, Murthy, MV, Yablochkin, NV, Mathivanan, K, Ling, MHT. 2020. A Case Study using Mitochondrial Genomes of the Order Diprotodontia (Australasian Marsupials) Suggests that Single Ortholog is Not Sufficient for Phylogeny. EC Clinical and Medical Case Reports 3(9): 93-114.

[83] Kamarudin, NJ, Wang, VCC, Tan, XT, Ramesh, A, Chew, SSM, Murthy, MV, Yablochkin, NV, Mathivanan, K, Ling, MHT. 2020. A Simulation Study on the Effects of Founding Population Size and Number of Alleles Per Locus on the Observed Population Genetic Profile: Implications to Broodstock Management. EC Veterinary Science 5(8): 176-180.

[82] Tan, XT, Ramesh, A, Wang, VCC, Kamarudin, NJ, Chew, SSM, Murthy, MV, Yablochkin, NV, Mathivanan, K, Ling, MHT. 2020. Core Pseudomonas Genome From 10 Pseudomonas Species. MOJ Proteomics & Bioinformatics 9(3): 68‒71.

[81] Gunalan, K, Wong, CQL, Neo, MPY, Ling, MHT. 2020. One Percent of Escherichia coli O157:H7 Peptides May Contain Putative Beta-Lactamase Activity. EC Microbiology 16(8): 73-79.

[80] Cheong, KC, Hon, RYH, Sander, CJ, Ang, IZL, Foong, JH, Ling, MHT. 2020. A Simulation Study on the Effects of Media Composition on the Growth Rate of Escherichia coli MG1655 using iAF1260 Model. Acta Scientific Microbiology 3(8): 40-44.

[79] Neo, CY, Ling, MHT. 2020. Prevalence and Length of Open Reading Frames Vary Across Randomly Generated Sequences of Different Nucleotide Compositions. EC Microbiology 16(7): 72-78.

[78] Sim, BKY, Ling, MHT. 2020. Possibility of Abiotic Genesis of Biochemistry. EC Microbiology 16(6): 104-109.

[77] Teng, RSY, Kwang, JCY, Chin, ASQ, Sander, CJ, Ang, IZL, Foong, JH, Cheong, KC, Hon, RYH, Ling, MHT. 2020. Correlation Analysis on Transcriptomes from Published Human Skin Studies Show Variations between Control Samples. EC Clinical and Medical Case Reports 3(6): 143-146.

[76] Ling, MHT. 2020. SeqProperties: A Python Command-Line Tool for Basic Sequence Analysis. Acta Scientific Microbiology 3(6): 103-106.