Page Index - ryandkuster/EPP_575_RNA_25 GitHub Wiki
53 page(s) in this GitHub Wiki:
- Home
- Welcome to the EPP_575_RNA wiki!
- Agenda
- Before the workshop begins, please check out:
- The directory we are using on ISAAC-NG:
- The data used for the RNA-Seq analyses
- Other useful links!
- 01 Introducing the Shell
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- 01 Introducting the Shell
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- 02 Navigating Files and Directories
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- 03 Working with Files and Directories
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- 04 Pipes and Filters
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- 06 Shell Scripts
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- Day 1
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- Day 2
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- Day 3
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- Day 4
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- Day 5
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- Getting started with UTIA Computing Resources
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- Installing relevant R, RStudio (posit), and R packages
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- Lab 01: Tour of ISAAC NG
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- Lab 02: QC
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- Lab 03: Mapping with STAR
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- Lab 04: IGV
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- Lab 05: Read Counting
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- Lab 06: DESeq2
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- Lab 07: GO Lab
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- Most Commonly Used Commands
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- Requesting resources with salloc
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- Using PowerShell for the first time
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