Page Index - patrick-douglas/Seqs-Extractor GitHub Wiki

40 page(s) in this GitHub Wiki:

• Home
• SeqsExtractor
• What Is SeqsExtractor ?
• Download SeqsExtractor
• Download Example files
• Paper to cite SeqsExtractor:
• BLAST and extract the sequences
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• Customize misa.ini file to modify parameters of SSRs identification
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• DEPRECATED Options
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• Example files of SeqsExtractor
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• Extract sequences using Blast result
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• Extracting sequences from any .FASTA file using any TEXT file
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• Extracting Trinity Differential Expression transcripts
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• Frequent asked questions (FAQ) and known bugs
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• How to install Seqs Extractor
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• How to run
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• Perform a friendly BLAST search
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• Perform a MISA search and extract sequences
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• Perform extraction of sequences from a MISA file
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• REFERENCES
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• Running an example for extraction from any text file
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• Running an example for MISA analysis
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• Third party software that comes with Seqs Extractor
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