Page Index - arklumpus/TreeViewer GitHub Wiki

31 page(s) in this GitHub Wiki:

• Home
• Command‐line interface
• Comparing trees
• Creating a new module
• Creating a new tree
• Crop regions and output DPI
• Custom formatters
• Custom scripts
• Defining parameters
• Developer's guide
• Displaying BLAST scores
• Displaying character states on a tree
• Documenting modules
• Drawing a tree highlighting support values
• Drawing an alignment with the tree
• Drawing taxon images
• Global settings
• Glossary
• Introduction
• legend
• Module parameters
• Module templates
• Modules
• Plotting multiple age distributions
• Plotting the age distributions in a time‐calibrated tree
• Plotting the results of a stochastic mapping analysis
• The interface
• The process
• Tree statistics
• Working with large trees from the command‐line interface
• Workload examples