Page Index - STAR-Fusion/STAR-Fusion GitHub Wiki
39 page(s) in this GitHub Wiki:
- Home
- Obtaining and Installing STAR-Fusion
- Getting started
- Running STAR-Fusion
- Running STAR-Fusion starting with FASTQ files (typical):
- Alternatively, Kickstart mode: running STAR yourself, and then running STAR-Fusion using the existing outputs
- Output from STAR-Fusion
- Further Inspection, Visualization, and Validation?
- Examine Effect of Fusions on Coding Regions
- Extract sequences adjacent to the fusion transcript breakpoint
- De novo reconstruct fusion transcripts using Trinity
- Example data and execution:
- Want to use Docker?
- Want to use Singularity?
- Want to use Terra?
- Contact Us
- Acknowledgements
- Referencing STAR-Fusion
- Funding
- Conda installation
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- Galaxy toolshed installation of the tool
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- installation troubleshooting
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- installing star fusion
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- rebuild_ctat_genome_lib_indices
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- Single Cell Visualization
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- STAR Fusion FAQ
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- STAR Fusion release and CTAT Genome Lib Compatibility Matrix
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- STAR Fusion scRNA seq
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- Terra
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