Page Index - DR-genomics/Genomics-pipelines GitHub Wiki

25 page(s) in this GitHub Wiki:

• Home
• Circos plots
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• CREU 2022 Raw data quality and Genome assembly
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• dnaPipeTE pipeline
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• Ecological Analysis TE distribution Mvim genome
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• Genome skim reads to Mvim genome (randomly subsequenced 1kb every 100kb segments in each chromosome)
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• Job submission in HPC cluster
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• MCScanx
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• RepeatExplorer2
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• RNAseq_Analysis_Pipeline
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• Transposomator
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• Whole paranome and ortholog Ks distributions using ksrates tool
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• Whole paranome and ortholog Ks distributions using wgd package
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