Page Index - zeeev/vcflib GitHub Wiki

15 page(s) in this GitHub Wiki:

• home
• What is GPAT++ ?
• 1KG population cheat sheet
• ABBA BABA
• Association testing with GPAT
• Basic population statistics with GPAT
• Calculating linkage disequilibrium with GPAT
• Haplotype plotting with GPAT
• hapLrt
• iHS
• Installing GPAT
• Nucleotide diversity with GPAT
• permutation
• Smoothing with GPAT
• xpEHH