Page Index - zeeev/vcflib GitHub Wiki

28 page(s) in this GitHub Wiki:

• home
• What is GPAT++ ?
• 1KG population cheat sheet
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• ABBA BABA
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• Association testing with GPAT
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• Basic population statistics with GPAT
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• Calculating linkage disequilibrium with GPAT
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• Haplotype plotting with GPAT
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• hapLrt
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• iHS
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• Installing GPAT
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• Nucleotide diversity with GPAT
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• permutation
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• Smoothing with GPAT
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• xpEHH
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