Page Index - xflouris/libpll GitHub Wiki

17 page(s) in this GitHub Wiki:

• Home
• Contributing to libpll
• API Reference
• A Beginner's guide to libpll
• API Reference
• Ascertainment bias correction
• Computing the likelihood of a tree
• Contributing to libpll
• Frequently Asked Questions
• Likelihood derivatives
• Managing libpll partition instances
• Notes
• Partition Attributes
• Setting model parameters
• Substitution Models
• Tree structure
• Updating transition probability matrices