Page Index - xflouris/libpll GitHub Wiki

30 page(s) in this GitHub Wiki:

• Home
• Contributing to libpll
• API Reference
• A Beginner's guide to libpll
• API Reference
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• Ascertainment bias correction
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• Computing the likelihood of a tree
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• Contributing to libpll
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• Frequently Asked Questions
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• Likelihood derivatives
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• Managing libpll partition instances
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• Notes
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• Partition Attributes
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• Setting model parameters
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• Substitution Models
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• Tree structure
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• Updating transition probability matrices
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