Localization Part 6 - veeninglab/BactMAP GitHub Wiki

Resources

Now you’ve seen how you can create and adapt the plots from the Bacillus dataset, do the same for the S. pneumoniae and S. aureus set or take one of your own datasets.

To learn more about the functions used in this tutorial, check the following parts of the documentation:

1. Data Import

2. Data Structure: mesh (segmentation), spots (localization) & TIFF images

3. plotRaw()

4. createPlotList()

5. Color Palettes

6. Saving your plots

7. Introduction to data visualization using ggplot2

8. Documentation of the B. subtilis, S. aureus and S. pneumoniae datasets

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