Saving Data - veeninglab/BactMAP GitHub Wiki

To save plots, use ggsave from the ggplot2 package:

ggsave(myPlot, filename="myPlot.PDF")

Alternatively, to save many plots in one PDF file, use cairo_pdf():

cairo_pdf("myPlots.PDF", onefile=TRUE)

myPlot1
myPlot2
myPlot3

dev.off()

To save R dataframes, use save:

save(myDataFrame, file="myDataFrame.Rda")

To save R dataframes as CSV, use write_csv from the package readr:

#only run if you didn't install readr yet:
install.packages("readr")

#and save:
write_csv(myDataFrame, "myDataFrame.csv")