Page Index - neuralabc/documentation GitHub Wiki

61 page(s) in this GitHub Wiki:

• Home
• Essential resources
• Brain Structure and Function
• KINARM
• Resources for New Students
• Working with the machines in the lab
• A comprehensive overview
• Using the VPN
• Graphical Visualization from Home
• Running processes while logged out
• MRI manipulation
• Experimental setups, code, and instructions
• Useful code snippets and descriptions
• Access Card and Lab Keys
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• antsApplyTransforms Forward and inverse warps for warping images
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• Bayesian data analysis with pymc3
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• Converting dicom to BIDS format .nii.gz a walkthrough
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• Creating Docs for a package and Uploading it to Pypi
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• Dimensionality reduction techniques
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• Forward port from server for ssh connection to Jupyter (or other)
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• Generating parcels and computing summaries for subsequent analysis
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• Google Colab Information
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• Installing Linux as Dual boot
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• Introductory Guide Part 1 — Welcome to the Neural ABC Lab and Linux!
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• Introductory Guide Part 2 — Introduction to Python (CrashCourse)
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• Introductory Guide Part 3 — Cool Resources to Help EVERYONE
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• Kinarm Resources
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• Linear Mixed Models
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• Mahalanobis Distance (D2) in the Optic Radiations (Lab Rotation Project)
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• Mrtrix3
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• Neuroanatomy and Neuroscience Resources (basics )
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• Organizing your workflow tips & BIDS standard
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• Reducing number of terminals and saving terminals with tmux (Linux)
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• Remote Desktop connection via X2Go
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• Sequential Pinch Force Task (SPFT)
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• Travel awards
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• VPN Access
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