Page Index - ma-compbio/Higashi GitHub Wiki

57 page(s) in this GitHub Wiki:

• Home
• What is Higashi
• Contact
• Change Log
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• Citing Higashi
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• Configure the parameters
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• Configure the parameters for Fast Higashi
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• Contact map style configuration
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• Dataset selection
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• Embeddings visualization
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• Fast Higashi Gallery
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• Fast Higashi Usage
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• Higashi Requirements
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• Higashi Usage
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• Higashi Usage API
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• Higashi vis
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• Higashi vis Usage
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• Input Files
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• Known Issues
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• List of scHi C datasets
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• Navigate the analysis results
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• Other components
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• Output of Higashi analysis
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• Output of Higashi main
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• Runtime of Fast Higashi
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• Runtime of Higashi
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• Single cell A B compartment calling
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• Single cell TAD calling
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• Synchronized navigation of contact maps
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• Visualization of analysis results
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