List of scHi C datasets - ma-compbio/Higashi GitHub Wiki
scHi-C datasets studied in Higashi.
| Dataset name | Link | Description |
|---|---|---|
| Ramani et al. | GEO: GSE84920 | sci-Hi-C of four cell types |
| Nagano et al. | GEO: GSE94489 | scHi-C of mouse embryonic stem cells (cell cycle) |
| Kim et al. | 4DN Data Portal: 4DNES4D5MWEZ, 4DNESUE2NSGS, 4DNESIKGI39T, 4DNES1BK1RMQ and 4DNESTVIP977) | sci-Hi-C of five cell types |
| WTC-11 scHi-C | 4DN Data Portal: 4DNESF829JOW and 4DNESJQ4RXY5 | scHi-C of WTC-11 iPSC cell line from Bing Ren's lab |
| Lee et al. | GEO: GSE130711 | sn-m3c-seq of human prefrontal cortex cells |