Page Index - jsgounot/metagenomic-pipelines GitHub Wiki

45 page(s) in this GitHub Wiki:

• Home
• Abundance analyses
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• Annotation and pathway analysis
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• Antimicrobial Resistance genes (ARG)
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• AWS s3 management
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• Biological Gene Clusters (BGC)
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• Cmd and code reminder
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• Database download and usage
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• Dimensions reduction
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• Fasta compression
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• Genomes comparison
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• Isolate assembly
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• Metagenome database
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• Metagenomes diversity
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• Metagenomic assembly
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• Normalization, transformation and models
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• Other
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• Phylogeny
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• Python stuff
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• Reads compression
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• Reads decontamination
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• Reads manipulation
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• Submitting data on ENA
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