Page Index - biobakery/biobakery GitHub Wiki
153 page(s) in this GitHub Wiki:
- Home
- bioBakery tools for meta'omic profiling
- Microbial community profiling
- Downstream analysis and statistics
- Infrastructure and utilities
- Notes
- anadama2
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- anpan
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- anpan_advanced
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- anpan_gene_model
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- anpan_pathway_randomeffects
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- anpan_pglmm
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- ANPAN_StrainPhlAn
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- Assembly workflow
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- banocc
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- BAQLaVa
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- biobakery_advanced
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- biobakery_basic
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- biobakery_internal
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- biobakery_wiki
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- biobakery_workflows
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- biobakery_workshop
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- ccrepe
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- FUGAsseM
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- graphlan
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- halla
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- halla_legacy
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- humann
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- humann1
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- humann2
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- humann3
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- humann4
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- Introduction to Command line Unix
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- Introduction to R
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- kneaddata
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- lefse
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- MaAsLin
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- maaslin1
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- MaAsLin2
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- MaAsLin3
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- macarron
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- melonnpan
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- Metagenomic analysis of the Ethiopian cohort
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- Metagenomic Visualizations
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- metaphlan
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- MetaPhlAn 4.1
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- metaphlan1
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- metaphlan2
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- metaphlan3
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- metaphlan4
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- metawibele
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- micropita
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- MMUPHin
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- MTX model 3
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- MTXmodel_tutorial
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- parathaa
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- PhyloPhlAn 3 0 Example 03 Metagenomic application
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- PhyloPhlAn 3 Example 01 S aureus
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- PhyloPhlAn 3 Example 02 Tree of life
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- PhyloPhlAn 3 Example 03 Metagenomic application
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- PhyloPhlAn 3 Example 04 E coli
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- PhyloPhlAn 3 Example 05 Proteobacteria
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- PhyloPhlAn1
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- PhyloPhlAn2
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- PhyloPhlAn3
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- ppanini
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- shortbred
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- SparseDOSSA
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- SparseDOSSA2
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- strainphlan
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- strainphlan1
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- StrainPhlAn3
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- strainphlan4
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- Tutorial version 3.0 Metagenomic analysis of the Ethiopian cohort
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- Tutorial version Metagenomic analysis of the Ethiopian cohort
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- User_FAQs
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- waafle
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- WAAFLE v1.0
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- Wordpress workshop tutorial
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