Page Index - biobakery/biobakery GitHub Wiki
75 page(s) in this GitHub Wiki:
- Home
- bioBakery tools for meta'omic profiling
- Microbial community profiling
- Downstream analysis and statistics
- Infrastructure and utilities
- Notes
- anadama2
- anpan
- anpan_advanced
- anpan_gene_model
- anpan_pathway_randomeffects
- anpan_pglmm
- ANPAN_StrainPhlAn
- banocc
- BAQLaVa
- biobakery_advanced
- biobakery_basic
- biobakery_internal
- biobakery_wiki
- biobakery_workflows
- biobakery_workshop
- ccrepe
- FUGAsseM
- graphlan
- halla
- halla_legacy
- humann
- humann1
- humann2
- humann3
- Introduction to Command line Unix
- Introduction to R
- kneaddata
- lefse
- MaAsLin
- maaslin1
- MaAsLin2
- MaAsLin3
- macarron
- melonnpan
- Metagenomic Visualizations
- metaphlan
- MetaPhlAn 4.1
- metaphlan1
- metaphlan2
- metaphlan3
- metaphlan4
- metawibele
- micropita
- MMUPHin
- MTX model 3
- MTXmodel_tutorial
- parathaa
- PhyloPhlAn 3.0: Example 03: Metagenomic application
- PhyloPhlAn 3: Example 01: S. aureus
- PhyloPhlAn 3: Example 02: Tree of life
- PhyloPhlAn 3: Example 03: Metagenomic application
- PhyloPhlAn 3: Example 04: E. coli
- PhyloPhlAn 3: Example 05: Proteobacteria
- PhyloPhlAn1
- PhyloPhlAn2
- PhyloPhlAn3
- ppanini
- shortbred
- SparseDOSSA
- SparseDOSSA2
- strainphlan
- strainphlan1
- StrainPhlAn3
- strainphlan4
- Tutorial version 3.0: Metagenomic analysis of the Ethiopian cohort
- Tutorial version: Metagenomic analysis of the Ethiopian cohort
- User_FAQs
- waafle
- Wordpress workshop tutorial