Page Index - bcb420-2025/Izumi_Ando GitHub Wiki

60 page(s) in this GitHub Wiki:

• Home
• Quick Self Intro
• Course Journal - P1
• Course Journal - P2 Notes from Readings
• Assignments
• Other Pages
• Entry 10: The Human Protein Atlas (Annotation Source Assignment)
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• Entry 11: Differential Expression Analysis (week 7 lecture notes)
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• Entry 12: Assignment 2 Workflow
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• Entry 13: ORA (week 8 lecture notes)
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• Entry 14: G:Profiler Assignment
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• Entry 15: Lecture notes weeks 10 to 12
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• Entry 16: Assignment 3 Workflow
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• Entry 17: GSEA Assignment
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• Entry 1: Account Set Up
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• Entry 2: Notes from Prep Material
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• Entry 3: Plagiarism Module in Bioinfo Prep
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• Entry 4: R Basics Notes
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• Entry 5: Bioinformatics Basics
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• Entry 6: Rmd & Finding a Dataset (Week 3, 4 lecture notes)
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• Entry 7: Process of Finding a Dataset
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• Entry 8: Working with Data(week 5 lecture notes)
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• Entry 9: Assignment 1 Workflow
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• insights!
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• Useful Resources
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• Week 10: GSEA
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• Week 11: EM Protocol
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• Week 1: Reproducibility
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• Week 3: Overview of RNA Seq
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• Week 4: Normalization
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• Week 5: DE Protocol
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• Week 6: edgeR
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• Week 8: ORA
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