Entry 2: Notes from Prep Material - bcb420-2025/Izumi_Ando GitHub Wiki
Unit 1 Bioinfo Prep
2 Wiki - Editing
- Secion 2.5 Editing Basics covers Markdown essential to make the wiki as readable and aesthetic as possible. Refer back to this when you want to make it look a particular way.
- Do not use categories (2.5.11) for this course. This along with other features such as signatures, templates etc are not supported in github wikimedia implementation.
- **COME BACK TO THIS: ** not sure what 2.6 means. Should the titles of my journal entries have prefixes like "User:/BCB410-Journal" ???
- All submissions for this course must be open source under creative commons or MIT license
3 Your Course Journal
- markup code using the
GeSHi
extension - content to generally include: objective, estimate duration, workflows (anything necessary for reproducibility), conclusions
- wiki-markup templates for journal entries
4 Insights!
- pay attention to your thought processes in this course and record interesting thoughts on the insights! page
Plagiarism and academic integrity
Entry-3:-Plagiarism-Module-in-Bioinfo-Prep come back to this
Tasks
- Task 1 - complete
- Task 2 - half complete, need to find Prof Isserlin's User Page -> note: skipped creating the Journal page for now because I found it unnecessary but I could add it later
- Task 3 - complete
To Do's for myself, things that are unclear
- figure out namespaces and categories
- is this Github wiki supposed to be viewable in a Wikipedia or course wiki type UI?
- where can I find the rubric for the course journal? -> not sure how up to date this is but this is the rubric linked in chapter 4
- a little confused, it says "I would prefer that you do not create new categories" but the tasks ask for categories to be added...?
- are the tags supposed to be working...?
{{CC-BY}}