Page Index - McIntyre-Lab/TranD GitHub Wiki

38 page(s) in this GitHub Wiki:

• Home
• Welcome to the TranD project!
• TranD Table of Contents
• Introduction to TranD:
• User Guide
• Output File Column Descriptions
• TranD Precomputed Data
• Transcript Model Map
• Utility Descriptions
• Suggested Best Practices for Long Reads
• TranD Analysis Examples:
• Drosophila Species Comparison
• Long Read Method Comparison
• Human Annotation Comparison
• New Data Requests
• Preprint
• Create within Species Transcript Model Map
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• Drosophila Comparison Archive
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• Drosophila Species Comparison (D. melanogaster vs. D. simulans)
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• Human Annotation Archive
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• Human Annotation Comparison (RefSeq vs. Ensembl)
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• Long read Method Comparison (Drosophila PacBio)
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• Output File Column Descriptions
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• Precomputed Files
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• Suggested Best Practices for Long Reads
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• User Guide
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• Utility Descriptions (with Examples)
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