Page Index - Ecogenomics/GTDBNCBI GitHub Wiki

67 page(s) in this GitHub Wiki:

• Home
• Add Surveillance Genomes
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• BioProjects verified to have isolates
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• Checkm2 metadata
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• Create GTDB SSU tree
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• Create SILVA SSU mapping file
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• Explicitly defining synonym species
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• Fungi Sync with RefSeq GenBank
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• Generate new exception lists
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• Generate Ribosomal Metadata
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• Generating data files for GTDB website
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• GTDB 226
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• GTDB R200
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• GTDB R201
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• GTDB R202
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• GTDB R207
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• GTDB R214
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• GTDB R220
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• GTDB R232
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• GTDB R95
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• GTDB R98
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• Infer and decorate tree for new release
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• Internal GTDB Release Notes
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• Select Strains
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• Seqcode parsing
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• Sync with RefSeq GenBank
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• Taxonomy
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• Update database metadata
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• Update GTDB taxonomy
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• Update LTP Database
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• Update Silva
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• Updating GTDB species representatives
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• Updating website
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• Useful PostgresQL Commands
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