Page Index - DeepPhe/DeepPhe-Release GitHub Wiki
177 page(s) in this GitHub Wiki:
- Home
- Cancer Deep Phenotype Extraction, Translational Medicine (DeepPhe-XN)
- Getting started
- Installing DeepPhe-XN
- After Installation
- Specifying and Interpreting Output
- Beyond the basics
- AbstractNaaccrItem
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- Additional Output Files
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- Advanced Topics
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- BiomarkerFinder
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- BiomarkerFinderNew
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- CancerAttributeAdjuster
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- ClockFaceFinder
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- Command Line Execution
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- Contact Help
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- CrRelationFinder
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- CrSectionizer
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- DeepPhe Output
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- DeepPhe XN Viz
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- DiseaseAttributeFinder
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- DistancedRemover
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- DistinctValueFinder
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- DocEpisodeTagger
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- DoubledEventRemover
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- Evaluating System Results
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- Example File Data Specifics
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- Funding
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- GeneFinder
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- GleasonFinder
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- GleasonFinderNew
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- GradeFinder
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- GradeFinderNew
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- GraphRelationFinder
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- HistologyFinder
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- HistoryAdjuster
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- Hl7Reader
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- InDocUriRelationFinder
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- InfoItemType
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- Input and Output Directories
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- Input File Requirements
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- Installation Windows v4
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- JsonNodeCreator
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- Ki67Finder
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- Known Issues
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- Linux Installation Instructions
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- LonerNegator
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- Mac Installation Instructions
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- MassFilter
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- MelanomaDocEpisodeTagger
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- Mission Statement
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- NaaccrDirHandler
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- NaaccrDocument
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- NaaccrFileHandler
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- NaaccrItem
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- NaaccrItemGetter
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- NaaccrItemType
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- NaaccrPatient
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- NaaccrSection
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- NaaccrSectionGetter
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- NaaccrSectionType
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- NaaccrTumor
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- NaaccrXmlFile
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- NaaccrXmlReader
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- NonGraphedRelationFinder
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- NotYet
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- PatientNodeCollector
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- PatientSummaryCleaner
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- Pipeline Description
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- Pipeline Runner GUI Configuration
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- PipelineStopper
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- PittHeaderAnnotator
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- PsaFinder
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- Quick Start
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- Quickstart Tutorial for Mac
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- Quickstart Tutorial For Windows
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- RegistryXmlHandler
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- RegistryXmlReader
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- Sample Patient Data Details
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- Section Headings
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- SectionIdSetter
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- Sectionizer
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- SectionRemover
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- Specifying and Interpreting Outputs
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- StageFinder
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- SubjectAdjuster
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- TnmFinderAe
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- TopographyFinder
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- Understanding DeepPhe Output
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- Wiki Style
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- Windows Installation Instructions
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- WtfSectionFixer
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