Page Index - wdlingit/cop GitHub Wiki

31 page(s) in this GitHub Wiki:

• Home
• From ontology annotation results to enrichment computation
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• General setup
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• GFF3 handling, Araport11 AtRTD2 merge
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• GFF3 handling, Araport11 example
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• Ribo seq 3bp periodicity preference
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• Ribo seq based ORF prediction
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• Ribo seq read mapping
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• Ribo seq read mapping, customization example
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• Riboseq multi stage mapping and filtering
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• Riboseq multi stage mapping and filtering, part 0
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• Riboseq multi stage mapping and filtering, part 1
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• Riboseq multi stage mapping and filtering, part 2
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• Riboseq multi stage mapping and filtering, part 3
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• Riboseq multi stage mapping and filtering, part 4
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• Summarize ISOseq isoforms
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