Whole Network Analysis (AIS) - pwollstadt/IDTxl GitHub Wiki
To analyse the whole network, use the analyse_network
method and provide the required data
and settings
arguments.
results = network_analysis.analyse_network(settings=settings,
data=data)
The algorithm will loop over all processes in the network and analyse each of them separately. The results will finally be combined in an Results object. By default, an FDR correction will be performed when combining the results from different processes (Benjamini, 1995, J Royal Stat Soc B, 57(1)). In order to skip the FDR correction, refer to the tutorial on Statistical Significance Tests.
Restricting the set of processes analysed
The optional argument processes
can be passed to the analyse_network
method in order to restrict the analysis to a specific list of processes.
results = network_analysis.analyse_network(settings=settings,
data=data,
processes=[0, 2, 3])