TableInfo: subject_role_taxonomy.tsv - nih-cfde/published-documentation GitHub Wiki

The subject_role_taxonomy.tsv table is used to attach taxonomic labels to subjects.

Usage notes:

  • Please see the technical docs for a complete discussion of the rules governing the use of this table.
Field Field Description Required? Field Value Type Extra Info
subject_id_namespace Identifier namespace for this subject Required string This will be the value of id_namespace in the row in subject.tsv corresponding to the subject referenced in this row. If your program has not registered multiple CFDE identifier namespaces, this will be exactly the same value for all rows.
subject_local_id The ID of this subject Required string This will be the value of local_id in the row in subject.tsv corresponding to the subject referenced in this row.
role_id A CFDE CV term categorizing the role assigned to this organism-level constituent component of this subject Required enum of strings Table of allowed values
taxonomy_id An NCBI Taxonomy Database ID Required string NCBI Taxonomy Browser
---
Note formatting: be sure to prefix numeric taxon IDs with "NCBI:txid"
---
Example (for "9606"): NCBI:txid9606
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