TableInfo: ptm_type.tsv - nih-cfde/published-documentation GitHub Wiki

The ptm_type.tsv table will have as many rows as the number of unique ptm_type terms appearing in the ptm_type column of ptm.tsv. This table can be empty (header-row only).

Field Field Description Required? Field Value Type Extra Info
id A valid ptm_type ID from Gene Ontology Required string Example: GO:0006486 OR GO:0006468
name A short, human-readable, machine-readable label for this Gene Ontology term Required string protein glycosylation OR protein phosphorylation
description A human-readable description of this Gene Ontology term Optional string A suitable GO term from the biological process branch (e.g., Browse at obolibrary OR AmiGO), excluding regulation
synonyms A list of synonyms for this term as identified by the Gene Ontology metadata Optional JSON array of strings Example: ["text1", "text2"]. Provide an empty JSON array [] if a value is null.