TableInfo: anatomy.tsv - nih-cfde/published-documentation GitHub Wiki

This table must not be manually created. Users should skip this, and all other tables marked "Built by script" in this summary, preparing only the rest of their datapackage's TSV files (those marked "Prepared by submitter") for submission. Once the "Prepared by submitter" tables are ready, users should then use the C2M2 submission prep script to automatically generate this table (and the other "Built by script" tables) using the information in the "Prepared by submitter" tables.

The anatomy.tsv table will have as many rows as the number of unique UBERON terms appearing in the anatomy column of biosample.tsv.

Field	Field Description	Required?	Field Value Type	Extra Info
id	A valid UBERON term	Required	string	UBERON lookup service Example: UBERON:0006956
name	A short, human-readable, machine-read-friendly label for this UBERON term	Required	string
description	A human-readable description of this UBERON term	Optional	string
synonyms	A list of synonyms for this term as identified by the UBERON metadata	Optional	JSON array of strings	provide empty JSON array [] if value is null