Page Index - nesi/applications GitHub Wiki
438 page(s) in this GitHub Wiki:
- Home
- Top applications
- All software (alphabetically)
- A
- B
- C
- D
- E
- F
- G
- H
- I
- J
- K
- L
- M
- N
- O
- P
- Q
- R
- S
- T
- U
- V
- W
- X
- Y
- Z
- Abaqus
- ABYSS
- Amber
- amber
- AMOS
- AmpliconNoise
- ANSYS
- ant
- ANTLR
- ANTs
- argtable
- ATLAS
- AtomEye
- Augustus
- autoconf
- automake
- BamTools
- BayeSSC
- BCFtools
- beagle lib
- BEAST
- binutils
- BioPerl
- Bison
- BLACS
- BLAST
- BLAT
- blender
- boost
- bowtie
- Bowtie2
- bsoft
- bwa
- bzip2
- Cantera
- cd hit
- cdbfasta
- cegma
- CGAL
- Chapel
- clearcut
- Clustal Omega
- clustalw
- ClustalW2
- cmake
- COLUMBUS
- Compilers
- consel
- coot
- cppunit
- CrystalAnalysis
- ctffind
- cube
- CUDA
- Cufflinks
- cURL
- cutadapt
- Cytoscape
- DB
- Delft3D
- DendroPy
- DMTCP
- dosefgpu_driftcorr
- doxygen
- ea utils
- easybuilt
- eb.lua
- eeglab
- Eigen
- eigen3
- em2em
- EMAN
- ESyS Particle
- exonerate
- expat
- FASTASplitN
- FastTree
- FASTX Toolkit
- FFC
- ffmpeg
- FFTW
- fftw2
- fftw3
- FIAT
- fixesproto
- flex
- flexpart wrf
- fontconfig
- Free Applications
- freeglut
- freetype
- freexl
- FSL
- Full LengtherNEXT
- GAMESS US
- GapCloser
- GATK
- GCC
- gccxml
- GCTA
- GDAL
- GeFREALIGN
- geneid
- generic
- GenericLLExt
- GEOS
- gerris
- gettext
- gfsview
- GHC
- GLib
- gmap
- GMP
- gmpich2
- gmpolf
- gmvapich2
- gmvolf
- gnuplot
- goalf
- GOLD
- gompi
- google sparsehash
- goolf
- gplot
- gplots
- gpublast
- GRASS
- gromacs
- GROMOS++
- gromosXX
- GSL
- gts
- guile
- h5utils
- HaMStR
- Harminv
- HDF5
- Helyx os
- hmmer
- HPCToolkit
- hpctraceviewer
- hpcviewer
- HTSeq
- hwloc
- hydro2de
- hyphy
- Hypre
- I TASSER
- ibm
- icc
- iccifort
- icommands
- ictce
- ifort
- IGV
- IMa2
- ImageMagick
- imkl
- IMOD
- impi
- Infernal
- inputproto
- Instant
- Instruct
- intel
- intel mpi
- iomkl
- itac
- ITK
- JAGS
- JasPer
- Java
- Jellyfish
- julia
- JUnit
- kbproto
- KorfSNAP
- LAMARC
- lammps
- LAPACK
- libctl
- libdrm
- libffi
- libgd
- libgflags
- libglog
- libgtextutils
- libICE
- libjpeg turbo
- libleveldb
- liblmdb
- libmatheval
- libpciaccess
- libpng
- Libraries
- libreadline
- libSM
- libsnappy
- libspatialite
- libtool
- libunistring
- libX11
- libXaw
- libxcb
- libXcursor
- libXext
- libXfixes
- libXi
- libxml2
- libXmu
- libXpm
- libxslt
- libXt
- Lis
- LLVM
- Lmod
- M4
- MAFFT
- MAKER
- MaSuRCA
- Mathematica
- MATLAB
- matplotlib
- mdtest
- Meep
- Mesa
- metis
- microbiomeutil
- migrate
- Migrate n
- MLNX OFED
- model
- monolix
- mothur
- MPFR
- MPI BLAST
- mpiblast
- mpich2
- MrBayes
- msbayes
- msvar
- MUMmer
- MUMPS
- muscle
- mvapich2
- NAMD
- NASM
- NCBI BLAST+
- NCO
- ncurses
- ncview
- netCDF
- netCDF Fortran
- NetLogo
- NEURON
- NLopt
- nomad
- nonmem
- nseg
- NWChem
- Oases
- Octave
- OPARI2
- OpenBLAS
- OpenBUGS
- OpenCMISS
- OpenCV
- OpenFoam
- OpenMPI
- OpenSees
- OpenSSL
- orca
- OTF2
- ovito
- PAPI
- Paraview
- parmetis
- ParsInsert
- partitionfinder
- PAUP
- PCRE
- PDT
- PEAR
- Perl
- petsc
- pgi
- phenix
- PhyloBayesMPI
- PhyML
- PhymmBL
- picard
- Pillow
- pkg config
- plink
- PLY
- Povray
- pplacer
- ProbABEL
- PROJ4
- protobuf
- PyCogent
- PyNAST
- Python
- Qiime
- Qt
- queue
- R
- RAxML
- RDP Classifier
- rdp_classifier
- README
- README
- README
- readme
- readme
- readme
- readme
- README
- README
- README
- README
- README
- README
- README
- readme with html
- RECON
- Relion
- RepeatMasker
- RepeatScout
- ResMap
- RMBlast
- rna star
- Rosetta
- RSEM
- rtax
- Ruby
- Sage
- samblaster
- samtools
- SAS
- ScaLAPACK
- Scalasca
- ScientificPython
- scikit image
- Scipio
- SCons
- Score P
- SCOTCH
- SDL
- seq gen
- SeqPrep
- SGA
- SNAP
- snpEff
- SOAPdenovo
- SOAPdenovo2
- SOAPec
- SourceTracker
- SPIDER
- Spring
- SQLite
- sratoolkit
- sspace basic
- SuiteSparse
- supermagic
- SWIG
- sympy
- Szip
- tabix
- Tcl
- tcsh
- tophat
- trans ABySS
- trf
- trinity
- turbomole
- TurboVNC
- uclust
- UDUNITS
- UFL
- UltraBEAST
- Underworld
- UnixCommands
- USEARCH
- vasp
- vcftools
- velvet
- VirtualGL
- VTK
- VTune
- wise
- Wise2
- WPS
- WRF
- WRFDA
- WRFDomainWizard
- xcb proto
- xextproto
- xorg dir2proto
- xorg glproto
- xorg libxcb
- xorg macros
- xorg pciaccess
- xorg util macros
- xorg xcb proto
- xproto
- xtrans
- yasm
- zlib