papers - morinlab/LLMPP GitHub Wiki


title: 'Studies' bibliography: 'morinlab.bib'

Entity Method Paired samples Unpaired samples Cell lines Example gene Study
DLBCL Sanger 0 5 0 BCL2 @tanakaFrequentIncidenceSomatic1992
BL Sanger 0 0 9 MYC @johnstonCmycHypermutationBurkitt1992
DLBCL Sanger 11 28 0 MYC @pasqualucciHypermutationMultipleProtooncogenes2001
BL Sanger 0 24 0 TP53 @wildaInactivationARFMDM2p53Pathway2004
DLBCL Sanger 134 0 20 PRDM1 @pasqualucciInactivationPRDM1BLIMP12006
DLBCL Sanger FAS @schollMutationsRegionFAS2007
DLBCL Sanger 6 217 21 CARD11 @lenzOncogenicCARD11Mutations2008
DLBCL Sanger NFKBIA @lakeMutationsNFKBIAEncoding2009
DLBCL Sanger 0 101 TNFAIP3 @compagnoMutationsMultipleGenes2009
FL Sanger 11 251 0 TNFRSF14 @cheungAcquiredTNFRSF14Mutations2010
DLBCL, FL RNAseq, WGS 1 31 7 EZH2 @morinSomaticMutationsAltering2010
DLBCL Sanger 0 382 20 MYD88 @ngoOncogenicallyActiveMYD882011
DLBCL RNAseq, WGS 14 103 10 B2M @morinFrequentMutationHistonemodifying2011
DLBCL exome 6 92 23 CD36 @pasqualucciAnalysisCodingGenome2011
DLBCL, FL exome 7 134 0 CREBBP @pasqualucciInactivatingMutationsAcetyltransferase2011
DLBCL exome, Sanger BRAF @tiacciBRAFMutationsHairycell2011
BL RNAseq, WGS, exome 53 CCND3 @richterRecurrentMutationID32012
DLBCL Sanger MIR142 @kwanhianMicroRNA142Mutated202012
DLBCL WGS 40 0 0 CXCR4 @khodabakhshiRecurrentTargetsAberrant2012
DLBCL exome 55 0 0 ACTB @lohrDiscoveryPrioritizationSomatic2012
BL exome ACAD9 @loveGeneticLandscapeMutations2012
BL RNAseq C16orf48 @schmitzBurkittLymphomaPathogenesis2012
DLBCL exome 34 39 21 ARID1A @zhangGeneticHeterogeneityDiffuse2013
DLBCL Sanger 0 0 6 EBF1 @bohleRoleEarlyBcell2013
DLBCL WGS 40 0 13 ABI3BP @morinMutationalStructuralAnalysis2013
BL Sanger ARHGEF1 @muppidiLossSignalingGa132014
BL RNAseq 0 20 0 CCNF @abateDistinctViralMutational2015
DLBCL Sanger 24 0 0 STAT6 @yildizActivatingSTAT6Mutations2015
DLBCL Sanger MAP2K1 @shinBRAFV600EMAP2K12015
DLBCL exome 14 0 0 XPO1 @mareschalWholeExomeSequencing2016
FL WGS 5 0 0 ATP6AP1 @okosunRecurrentMTORC1activatingRRAGC2016
FL exome 22 0 0 MAP2K1 @louissaintPediatrictypeNodalFollicular2016
DLBCL exome 38 0 0 NFKBIE @morinGeneticLandscapesRelapsed2016
FL exome 61 69 0 ARID1A @krysiakRecurrentSomaticMutations2017
DLBCL exome 96 0 0 BTK @albuquerqueEnhancingKnowledgeDiscovery2017
DLBCL exome 400 601 0 ANKRD17 @reddyGeneticFunctionalDrivers2017
DLBCL exome 137 167 0 CCL4 @chapuyMolecularSubtypesDiffuse2018
DLBCL WGS 153 0 0 AICDA @arthurGenomewideDiscoverySomatic2018
DLBCL exome 48 526 0 CXCR5 @schmitzGeneticsPathogenesisDiffuse2018
BL exome 0 74 0 KMT2C @zhouSporadicEndemicBurkitt2019
BL RNAseq, exome 101 0 0 ALPK2 @paneaWholeGenomeLandscape2019
BL WGS 106 0 0 BACH2 @grandeGenomewideDiscoverySomatic2019
FL panel 0 305 0 CTSS @barariaCathepsinAlterationsInduce2020
DLBCL exome, panel 135 0 0 MS4A1 @rushtonGeneticEvolutionaryPatterns2020
DLBCL WGS 179 2 0 ACTG1 @hubschmannMutationalMechanismsShaping2021
BL panel 0 298 0 ADAMTS5 @burkhardtClinicalRelevanceMolecular2022
BL WGS 193 82 22 CDKN2C @thomasGeneticSubgroupsInform2023
FL exome, panel 0 370 0 ABL2 @russler-germainMutationsAssociatedProgression2023

References

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