ZFAT - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true
ZFAT
<<Warn("The variants reported in this gene in DLBCL failed QC")>>
History
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timeline
title Publication timing
2017-10-10 : Reddy : DLBCL
Relevance tier by entity
Entity | Tier | Description |
---|---|---|
![]() |
3 | Retired, Failed QC[@reddyGeneticFunctionalDrivers2017] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity | source | frequency (%) |
---|---|---|
DLBCL | GAMBL genomes | 1.34 |
DLBCL | Schmitz cohort | 2.77 |
DLBCL | Reddy cohort | 2.70 |
DLBCL | Chapuy cohort | 2.56 |
Mutation pattern and selective pressure estimates
Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
---|---|---|---|---|
BL | No | No | 0.000 | 0 |
DLBCL | No | No | 1.873 | 0 |
FL | No | No | 0.000 | 0 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
ZFAT Expression
All Mutations
Reddy_2235T Reddy_2475T Reddy_2616T Reddy_2662T Reddy_2720T Reddy_3388T Reddy_3399T Reddy_3429T Reddy_3472T Reddy_3521T Reddy_3642T Reddy_3687T Reddy_3745T Reddy_3834T Reddy_3845T Reddy_3913T Reddy_3923T Reddy_3943T Reddy_3950T Reddy_3983T Reddy_3991T Reddy_4000T