ZFAT - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

ZFAT

<<Warn("The variants reported in this gene in DLBCL failed QC")>>

History

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timeline
    title Publication timing
      2017-10-10 : Reddy : DLBCL

Relevance tier by entity

Entity Tier Description
DLBCL 3 Retired, Failed QC[@reddyGeneticFunctionalDrivers2017]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.34
DLBCL Schmitz cohort 2.77
DLBCL Reddy cohort 2.70
DLBCL Chapuy cohort 2.56

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 0.000 0
DLBCL No No 1.873 0
FL No No 0.000 0

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

ZFAT Expression

All Mutations

Reddy_2235T Reddy_2475T Reddy_2616T Reddy_2662T Reddy_2720T Reddy_3388T Reddy_3399T Reddy_3429T Reddy_3472T Reddy_3521T Reddy_3642T Reddy_3687T Reddy_3745T Reddy_3834T Reddy_3845T Reddy_3913T Reddy_3923T Reddy_3943T Reddy_3950T Reddy_3983T Reddy_3991T Reddy_4000T

References