WHAMM - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
WHAMM
History
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timeline
title Publication timing
2012-10-04 : Schmitz : BL
Relevance tier by entity
Entity |
Tier |
Description |
![BL](https://github.com/morinlab/LLMPP/wiki/images/icons/BL_tier2.png) |
2 |
relevance in BL not firmly established[@schmitzBurkittLymphomaPathogenesis2012] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
BL |
GAMBL genomes+capture |
1.15 |
BL |
Thomas cohort |
NA |
BL |
Panea cohort |
NA |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
No |
No |
0.909 |
0.000 |
DLBCL |
No |
No |
0.000 |
12.559 |
FL |
No |
No |
0.000 |
0.000 |
View coding variants in ProteinPaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/WHAMM_NM_001080435.svg)
View all variants in GenomePaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/WHAMM.svg)
WHAMM Expression
![](https://github.com/morinlab/LLMPP/wiki/images/gene_expression/WHAMM_by_pathology.svg)
References