WAC - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @reddyGeneticFunctionalDrivers2017, @rossiCodingGenomeSplenic2012,

TOC

Relevance tier by entity

include:tables/table1_WAC.md

Warnings

<<Warn("The variants reported in this gene in DLBCL failed QC")>>

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 2.68
DLBCL Schmitz cohort 3.40
DLBCL Reddy cohort 1.20
DLBCL Chapuy cohort 1.28

Mutation pattern and selective pressure estimates

include:tables/dnds_WAC.md

include:tables/browser_WAC.md

Expression

All Mutations

Reddy_2232T Reddy_2619T Reddy_2698T Reddy_2769T Reddy_2791T Reddy_2892T Reddy_2898T Reddy_2919T Reddy_2931T Reddy_2933T Reddy_2934T Reddy_2936T Reddy_2953T Reddy_2999T Reddy_3456T Reddy_3480T Reddy_3653T Reddy_3704T Reddy_3721T Reddy_3750T Reddy_3758T Reddy_3977T

include:tables/mermaid_WAC.md

References