Template - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @balSuperenhancerHypermutationAlters2022, @tanakaFrequentIncidenceSomatic1992, @sarkozyMutationalLandscapeGray2021, @burkhardtClinicalRelevanceMolecular2022

TOC

Overview

Relevance tier by entity

test

include:Template_Relevance.md

Warnings

may not exist

Mutation incidence from meta-analysis

sub headings per file here unless there is just one

DLBCL

include:tables/DLBCL_BCL2.md

FL

include:tables/FL_BCL2.md

BL

include:tables/BL_BCL2.md

Mutation pattern and selective pressure estimates

include:tables/dnds_BCL2.md

aSHM regions

section will only exist for certain genes

chr_name hg19_start hg19_end region regulatory_comment
chr6 90981034 91016134 TSS NA

Hotspots

section will only exist for certain genes

include:Template_Browser.md

Expression

include:Template_History.md

References