TRAF6 - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @hubschmannMutationalMechanismsShaping2021,

TOC

Relevance tier by entity

include:tables/table1_TRAF6.md

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.34
DLBCL Schmitz cohort 1.49
DLBCL Reddy cohort 0.90
DLBCL Chapuy cohort 1.28

Mutation pattern and selective pressure estimates

include:tables/dnds_TRAF6.md

TRAF6 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr11 36511924 C>A E345*
chr11 36511915 G>A Q348*
chr11 36511893 C>T W355*
chr11 36511892 C>T W355*

include:tables/browser_TRAF6.md

Expression

All Mutations

SP116630 SP193005 SP193312 SP59456

include:tables/mermaid_TRAF6.md

References