TNFRSF14 - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @spinaGeneticsNodalMarginal2016, @cheungAcquiredTNFRSF14Mutations2010a -->, @morinFrequentMutationHistonemodifying2011, @spinaGeneticsNodalMarginal2016b -->, @cheungAcquiredTNFRSF14Mutations2010,

TOC

Experimental Evidence

Driver mutations affecting this gene in DLBCL have been experimentally demonstrated to cause a reduction or loss of function (LOF).

Relevance tier by entity

include:tables/table1_TNFRSF14.md

Mutation incidence in large patient cohorts (GAMBL reanalysis)

DLBCL

include:tables/DLBCL_TNFRSF14.md

FL

include:tables/FL_TNFRSF14.md

Mutation pattern and selective pressure estimates

include:tables/dnds_TNFRSF14.md

TNFRSF14 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr1 2488104 A>G M1?
chr1 2488105 T>C M1?
chr1 2488105 T>G M1?
chr1 2488106 G>A M1?
chr1 2488107 G>T E2*
chr1 2488123 G>A W7*
chr1 2488124 G>A W7*
chr1 2488132 C>A P10H
chr1 2488138 G>A W12*
chr1 2488139 G>A W12*
chr1 2488152 A>T K17*
chr1 2488156 C>A T18N

include:tables/browser_TNFRSF14.md

Expression

include:tables/mermaid_TNFRSF14.md

References