SPEN - morinlab/LLMPP GitHub Wiki

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bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @reddyGeneticFunctionalDrivers2017, @albuquerqueEnhancingKnowledgeDiscovery2017, @schmitzGeneticsPathogenesisDiffuse2018, @sarkozyMutationalLandscapeGray2021, @rossiCodingGenomeSplenic2012,

TOC

Relevance tier by entity

include:tables/table1_SPEN.md

Mutation incidence in large patient cohorts (GAMBL reanalysis)

DLBCL

include:tables/DLBCL_SPEN.md

Mutation pattern and selective pressure estimates

include:tables/dnds_SPEN.md

SPEN Hotspots

Chromosome	Coordinate (hg19)	ref>alt	HGVSp
chr1	16256846	C>T	R1371*
chr1	16261814	C>T	R3027*

include:tables/browser_SPEN.md

Expression

include:tables/mermaid_SPEN.md

References