SEL1L3 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
SEL1L3
Relevance tier by entity
Entity |
Tier |
Description |
|
2-a |
aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
DLBCL |
GAMBL genomes |
5.16 |
DLBCL |
Schmitz cohort |
4.04 |
DLBCL |
Reddy cohort |
2.20 |
DLBCL |
Chapuy cohort |
NA |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
Yes |
No |
0.665 |
3.278 |
DLBCL |
Yes |
No |
1.724 |
0.000 |
FL |
Yes |
No |
2.299 |
0.000 |
aSHM regions
chr_name |
hg19_start |
hg19_end |
region |
regulatory_comment |
chr4 |
25861094 |
25868788 |
TSS |
NA |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
SEL1L3 Expression
References