RUNX1 - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

RUNX1

<<Warn("The variants reported in this gene in DLBCL failed QC")>>

History

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timeline
    title Publication timing
      2017-10-10 : Reddy : DLBCL

Relevance tier by entity

Entity Tier Description
DLBCL 3 Retired, Failed QC[@reddyGeneticFunctionalDrivers2017]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 0.96
DLBCL Schmitz cohort 0.85
DLBCL Reddy cohort 0.50
DLBCL Chapuy cohort 0.43

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 0 0
DLBCL No No 0 0
FL No No 0 0

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

RUNX1 Expression

All Mutations

Reddy_2148T Reddy_2156T Reddy_2237T Reddy_2241T Reddy_2551T Reddy_2581T Reddy_2585T Reddy_2692T Reddy_2784T Reddy_2873T Reddy_2928T Reddy_2995T Reddy_3408T Reddy_3532T Reddy_3604T Reddy_3636T Reddy_3946T Reddy_799T Reddy_830T

References