RUNX1 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true
RUNX1
<<Warn("The variants reported in this gene in DLBCL failed QC")>>
History
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timeline
title Publication timing
2017-10-10 : Reddy : DLBCL
Relevance tier by entity
Entity | Tier | Description |
---|---|---|
![]() |
3 | Retired, Failed QC[@reddyGeneticFunctionalDrivers2017] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity | source | frequency (%) |
---|---|---|
DLBCL | GAMBL genomes | 0.96 |
DLBCL | Schmitz cohort | 0.85 |
DLBCL | Reddy cohort | 0.50 |
DLBCL | Chapuy cohort | 0.43 |
Mutation pattern and selective pressure estimates
Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
---|---|---|---|---|
BL | No | No | 0 | 0 |
DLBCL | No | No | 0 | 0 |
FL | No | No | 0 | 0 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
RUNX1 Expression
All Mutations
Reddy_2148T Reddy_2156T Reddy_2237T Reddy_2241T Reddy_2551T Reddy_2581T Reddy_2585T Reddy_2692T Reddy_2784T Reddy_2873T Reddy_2928T Reddy_2995T Reddy_3408T Reddy_3532T Reddy_3604T Reddy_3636T Reddy_3946T Reddy_799T Reddy_830T