RRAGC - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true
RRAGC
History
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timeline
title Publication timing
2016-02-02 : Okosun : FL
2017-10-10 : Reddy : DLBCL
2021-05-05 : Hubschmann : DLBCL
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
 |
1 | high-confidence DLBCL gene[@reddyGeneticFunctionalDrivers2017;@hubschmannMutationalMechanismsShaping2021b ] |
 |
1 | high-confidence FL gene [@okosunRecurrentMTORC1activatingRRAGC2016a] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 1.72 |
| DLBCL | Schmitz cohort | 2.98 |
| DLBCL | Reddy cohort | 2.00 |
| DLBCL | Chapuy cohort | 0.43 |
| FL | GAMBL genomes | 10.85 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 0.000 | 0 |
| DLBCL | No | No | 2.679 | 0 |
| FL | No | Yes | 163.715 | 0 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
RRAGC Expression
