RNF144B - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
RNF144B
History
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timeline
title Publication timing
2019-09-26 : Panea : BL
Relevance tier by entity
Entity |
Tier |
Description |
![BL](https://github.com/morinlab/LLMPP/wiki/images/icons/BL_tier2.png) |
2-a |
aSHM target; Although recurrent, the relevance of mutations in BL is tenuous [@paneaWholeGenomeLandscape2019] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
BL |
GAMBL genomes+capture |
0.23 |
BL |
Thomas cohort |
0.40 |
BL |
Panea cohort |
NA |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
Yes |
No |
0 |
0 |
DLBCL |
Yes |
No |
0 |
0 |
FL |
Yes |
No |
0 |
0 |
aSHM regions
chr_name |
hg19_start |
hg19_end |
region |
regulatory_comment |
chr6 |
25861094 |
25868788 |
TSS |
NA |
View coding variants in ProteinPaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/RNF144B_NM_182757.svg)
View all variants in GenomePaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/RNF144B.svg)
RNF144B Expression
![](https://github.com/morinlab/LLMPP/wiki/images/gene_expression/RNF144B_by_pathology.svg)
References