RNF144B - morinlab/LLMPP GitHub Wiki


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RNF144B

History

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timeline
    title Publication timing
      2019-09-26 : Panea : BL

Relevance tier by entity

Entity Tier Description
BL 2-a aSHM target; Although recurrent, the relevance of mutations in BL is tenuous [@paneaWholeGenomeLandscape2019]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
BL GAMBL genomes+capture 0.23
BL Thomas cohort 0.40
BL Panea cohort NA

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes No 0 0
DLBCL Yes No 0 0
FL Yes No 0 0

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr6 25861094 25868788 TSS NA

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

RNF144B Expression

References