RHOH - morinlab/LLMPP GitHub Wiki


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RHOH

Relevance tier by entity

Entity Tier Description
DLBCL 2-a aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous [@pasqualucciHypermutationMultipleProtooncogenes2001a]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.15
DLBCL Schmitz cohort 0.43
DLBCL Reddy cohort 0.10
DLBCL Chapuy cohort NA

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes No 0.000 0
DLBCL Yes No 4.612 0
FL Yes No 0.000 0

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr4 40193105 40204231 TSS active_promoter

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

RHOH Expression

References