RFTN1 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @arthurGenomewideDiscoverySomatic2018, @dunsCharacterizationDLBCLPMBL2021,
Relevance tier by entity
include:tables/table1_RFTN1.md
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 4.59 |
| DLBCL | Schmitz cohort | 5.96 |
| DLBCL | Reddy cohort | 4.40 |
| DLBCL | Chapuy cohort | 4.70 |
Mutation pattern and selective pressure estimates
aSHM regions
| chr_name | hg19_start | hg19_end | region | regulatory_comment |
|---|---|---|---|---|
| chr3 | 16546433 | 16556786 | TSS | active_promoter-strong_enhancer |
include:tables/browser_RFTN1.md
Expression
include:tables/mermaid_RFTN1.md