PDS5B - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true
PDS5B
History
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timeline
title Publication timing
2013-08-15 : Morin : DLBCL
2021-05-05 : Hübschmann : FL
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
 |
2 | relevance in DLBCL not firmly established[@morinMutationalStructuralAnalysis2013] |
 |
2 | relevance in FL not firmly established [@hubschmannMutationalMechanismsShaping2021b] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 3.25 |
| DLBCL | Schmitz cohort | 4.47 |
| DLBCL | Reddy cohort | 1.80 |
| DLBCL | Chapuy cohort | 2.14 |
| FL | GAMBL genomes | 1.62 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 1.009 | 2.705 |
| DLBCL | No | No | 1.333 | 6.726 |
| FL | No | No | 0.000 | 9.065 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
PDS5B Expression
All Mutations
FL[@hubschmannMutationalMechanismsShaping2021b]
SP116618 SP116686 SP192804 SP193025 SP193130 SP59360 SP59452