PDE4DIP - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

PDE4DIP

History

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timeline
    title Publication timing
      2018-05-01 : Chapuy : DLBCL

Relevance tier by entity

Entity Tier Description
DLBCL 2 relevance in DLBCL not firmly established[@chapuyMolecularSubtypesDiffuse2018b]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes NA
DLBCL Schmitz cohort 3.83
DLBCL Reddy cohort 5.31
DLBCL Chapuy cohort 8.55

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 1.344 1.032
DLBCL No No 1.467 5.897
FL No No 2.010 7.866

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

PDE4DIP Expression

All Mutations

DLBCL-RICOVER_107-Tumor DLBCL-RICOVER_288-Tumor DLBCL-RICOVER_384-Tumor DLBCL-RICOVER_496-Tumor

References