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bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

NCOR1

<<Warn("The variants reported in this gene in DLBCL failed QC")>>

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
timeline
    title Publication timing
      2017-10-10 : Reddy : DLBCL

Relevance tier by entity

Entity	Tier	Description
	3	Retired, Failed QC[@reddyGeneticFunctionalDrivers2017]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity	source	frequency (%)
DLBCL	GAMBL genomes	2.10
DLBCL	Schmitz cohort	4.47
DLBCL	Reddy cohort	2.70
DLBCL	Chapuy cohort	2.14

Mutation pattern and selective pressure estimates

Entity	aSHM	Significant selection	dN/dS (missense)	dN/dS (nonsense)
BL	No	No	0.496	2.331
DLBCL	No	No	0.935	4.098
FL	No	No	1.147	0.000

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

NCOR1 Expression

All Mutations

Reddy_2133T Reddy_2260T Reddy_2482T Reddy_2534T Reddy_2544T Reddy_2577T Reddy_2603T Reddy_2771T Reddy_2805T Reddy_2828T Reddy_2838T Reddy_2909T Reddy_2947T Reddy_2955T Reddy_2956T Reddy_3389T Reddy_3412T Reddy_3422T Reddy_3519T Reddy_3532T Reddy_3586T Reddy_3659T Reddy_3675T Reddy_3681T Reddy_3734T Reddy_3743T Reddy_3816T Reddy_3820T Reddy_3829T Reddy_3846T Reddy_3849T Reddy_3889T Reddy_3895T Reddy_3906T Reddy_3931T

References