NCOR1 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true
NCOR1
<<Warn("The variants reported in this gene in DLBCL failed QC")>>
History
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timeline
title Publication timing
2017-10-10 : Reddy : DLBCL
Relevance tier by entity
Entity | Tier | Description |
---|---|---|
![]() |
3 | Retired, Failed QC[@reddyGeneticFunctionalDrivers2017] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity | source | frequency (%) |
---|---|---|
DLBCL | GAMBL genomes | 2.10 |
DLBCL | Schmitz cohort | 4.47 |
DLBCL | Reddy cohort | 2.70 |
DLBCL | Chapuy cohort | 2.14 |
Mutation pattern and selective pressure estimates
Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
---|---|---|---|---|
BL | No | No | 0.496 | 2.331 |
DLBCL | No | No | 0.935 | 4.098 |
FL | No | No | 1.147 | 0.000 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
NCOR1 Expression
All Mutations
Reddy_2133T Reddy_2260T Reddy_2482T Reddy_2534T Reddy_2544T Reddy_2577T Reddy_2603T Reddy_2771T Reddy_2805T Reddy_2828T Reddy_2838T Reddy_2909T Reddy_2947T Reddy_2955T Reddy_2956T Reddy_3389T Reddy_3412T Reddy_3422T Reddy_3519T Reddy_3532T Reddy_3586T Reddy_3659T Reddy_3675T Reddy_3681T Reddy_3734T Reddy_3743T Reddy_3816T Reddy_3820T Reddy_3829T Reddy_3846T Reddy_3849T Reddy_3889T Reddy_3895T Reddy_3906T Reddy_3931T