MPDZ - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
MPDZ
History
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timeline
title Publication timing
2013-08-15 : Morin : DLBCL
2015-02-12 : Reichel : PMBL
Relevance tier by entity
Entity |
Tier |
Description |
|
2 |
relevance in PMBL/cHL/GZL not firmly established[@reichelFlowSortingExome2015a] |
|
2 |
relevance in DLBCL not firmly established[@morinMutationalStructuralAnalysis2013] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
DLBCL |
GAMBL genomes |
6.31 |
DLBCL |
Schmitz cohort |
11.70 |
DLBCL |
Reddy cohort |
5.61 |
DLBCL |
Chapuy cohort |
2.99 |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
No |
No |
2.932 |
8.789 |
DLBCL |
No |
No |
0.632 |
1.772 |
FL |
No |
No |
2.769 |
0.000 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
MPDZ Expression
All Mutations
DLBCL[@morinMutationalStructuralAnalysis2013]
RG054
RG064
RG081
RG115
RG130
References