MPDZ - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

MPDZ

History

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timeline
    title Publication timing
      2013-08-15 : Morin : DLBCL
      2015-02-12 : Reichel : PMBL

Relevance tier by entity

Entity Tier Description
PMBL 2 relevance in PMBL/cHL/GZL not firmly established[@reichelFlowSortingExome2015a]
DLBCL 2 relevance in DLBCL not firmly established[@morinMutationalStructuralAnalysis2013]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 6.31
DLBCL Schmitz cohort 11.70
DLBCL Reddy cohort 5.61
DLBCL Chapuy cohort 2.99

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 2.932 8.789
DLBCL No No 0.632 1.772
FL No No 2.769 0.000

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

MPDZ Expression

All Mutations

DLBCL[@morinMutationalStructuralAnalysis2013]

RG054 RG064 RG081 RG115 RG130

References