MAGEC1 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib'
csl: 'NLM.csl'
link-citations: true
MAGEC1
History
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timeline
title Publication timing
2023-07-26 : Russler : FL
Relevance tier by entity
Entity |
Tier |
Description |
![FL](https://github.com/morinlab/LLMPP/wiki/images/icons/FL_tier2.png) |
2 |
relevance in FL not firmly established[@russler-germainMutationsAssociatedProgression2023b] |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
Entity |
source |
frequency (%) |
FL |
GAMBL genomes |
1.85 |
Mutation pattern and selective pressure estimates
Entity |
aSHM |
Significant selection |
dN/dS (missense) |
dN/dS (nonsense) |
BL |
No |
Yes |
26.895 |
0.000 |
DLBCL |
No |
No |
1.032 |
4.703 |
FL |
No |
No |
0.000 |
0.000 |
MAGEC1 Hotspots
Chromosome |
Coordinate (hg19) |
ref>alt |
HGVSp |
chrX |
140993821 |
T>G |
L211V |
chrX |
140993827 |
A>C |
I213L |
chrX |
140994066 |
G>C |
Q292H |
chrX |
140994280 |
A>G |
T364A |
View coding variants in ProteinPaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/MAGEC1_NM_005462.svg)
View all variants in GenomePaint hg19 or hg38
![](https://github.com/morinlab/LLMPP/wiki/images/proteinpaint/MAGEC1.svg)
MAGEC1 Expression
![](https://github.com/morinlab/LLMPP/wiki/images/gene_expression/MAGEC1_by_pathology.svg)
References