LIN54 - morinlab/LLMPP GitHub Wiki
bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @reddyGeneticFunctionalDrivers2017,
Relevance tier by entity
include:tables/table1_LIN54.md
Warnings
<<Warn("The variants reported in this gene in DLBCL failed QC")>>
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 0.57 |
| DLBCL | Schmitz cohort | 2.13 |
| DLBCL | Reddy cohort | 0.90 |
| DLBCL | Chapuy cohort | 0.85 |
Mutation pattern and selective pressure estimates
include:tables/browser_LIN54.md
Expression
All Mutations
Reddy_2164T Reddy_2225T Reddy_2473T Reddy_2634T Reddy_2768T Reddy_2899T Reddy_3403T Reddy_3419T Reddy_3493T Reddy_3608T Reddy_3636T Reddy_3813T Reddy_3827T Reddy_4000T
include:tables/mermaid_LIN54.md
References
[@reddyGeneticFunctionalDrivers2017]