KMT2D - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @rossiCodingGenomeSplenic2012, @deschGenotypingCirculatingTumor2020, @morinFrequentMutationHistonemodifying2011, @beaLandscapeSomaticMutations2013

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Overview

KMT2D (also known as MLL2) encodes a histone H3K4 methyltransferase, playing a crucial role in germinal center B cell development and function. Mutations in KMT2D are among the most common mutations in FL and are also common in DLBCL.[@morinFrequentMutationHistonemodifying2011] KMT2D mutations are recurrent but less common in BL and MCL and many other B-cell neoplasms. Mutations typically cause loss of KMT2D function, leading to diminished H3K4 methylation, impacting gene expression that favours lymphomagenesis. KMT2D mutations are associated with poor prognosis in DLBCL.[@deschGenotypingCirculatingTumor2020; @morinFrequentMutationHistonemodifying2011]

First identified as mutated in DLBCL and FL in 2011 by Morin et al.[@morinFrequentMutationHistonemodifying2011] Mutations were later described in MCL in 2013 by Bea et al.[@beaLandscapeSomaticMutations2013] KMT2D mutations were later reported in BL by Grande et al.[@grandeGenomewideDiscoverySomatic2019]

Experimental Evidence

Driver mutations affecting this gene in BL/DLBCL/FL have been experimentally demonstrated to cause a reduction or loss of function (LOF).[@zhangDisruptionKMT2DPerturbs2015]

Relevance tier by entity

include:tables/table1_KMT2D

Mutation incidence in large patient cohorts (GAMBL reanalysis)

DLBCL

include:tables/DLBCL_KMT2D.md

FL

include:tables/FL_KMT2D.md

BL

include:tables/BL_KMT2D.md

MCL

include:tables/MCL_KMT2D.md

Mutation pattern and selective pressure estimates

include:tables/dnds_KMT2D.md

include:tables/browser_KMT2D.md

Expression

include:tables/mermaid_KMT2D.md

References