ID3 - morinlab/LLMPP GitHub Wiki


bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @richterRecurrentMutationID32012, @spinaGeneticsNodalMarginal2016, @schmitzBurkittLymphomaPathogenesis2012

TOC

Overview

ID3 was first reported as mutated in BL in 2012 by Richter et al.[@richterRecurrentMutationID32012] The existence of mutations in DLBCL were described in 2012 by Schmitz et al[@schmitzBurkittLymphomaPathogenesis2012] and later in MZL by Spina et al.[@spinaGeneticsNodalMarginal2016]

Relevance tier by entity

include:tables/table1_ID3

Mutation incidence in large patient cohorts (GAMBL reanalysis)

DLBCL

include:tables/DLBCL_ID3.md

BL

include:tables/BL_ID3.md

Mutation pattern and selective pressure estimates

include:tables/dnds_ID3.md

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr1 23885584 23885835 TSS NA

include:tables/browser_ID3.md

Expression

include:tables/mermaid_ID3.md

References